Now that was an unexpected development. So poor Shepard got cloned/resurrected once again? But it's been several hundred years since the Reaper wars, so have these Way people invented something like the Tleilaxu ghola technology?
Funny though that they'd kidnap Liara to show her their Shepard.
The escape was also well done, but seriously, how did Liara obtain that virus to hack everything? Her VI wasn't offline, she just should couldn't talk to it? But how does it run then, and how can it connect to anything?
Which reminds me - whatever happened to the SB drone, Glyph?